Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl54Q9CPW3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl54Q9CPW3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl54Q9CPW3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl54Q9CPW3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mrpl54Q9CPW3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Mrpl54Q9CPW3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Mrpl54Q9CPW3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mrpl54Q9CPW3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Mir3960-201ENSMUST00000198213 73 ntBASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Mrpl54Q9CPW3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.23■□□□□ 0.51
Mrpl54Q9CPW3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mrpl54Q9CPW3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mrpl54Q9CPW3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Mrpl54Q9CPW3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mrpl54Q9CPW3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms