Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim34aQ99PP6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim34aQ99PP6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Trim34aQ99PP6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim34aQ99PP6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim34aQ99PP6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim34aQ99PP6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim34aQ99PP6 Gm7160-202ENSMUST00000188519 1027 ntBASIC25.53■■□□□ 1.68
Trim34aQ99PP6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC25.53■■□□□ 1.68
Trim34aQ99PP6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim34aQ99PP6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim34aQ99PP6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim34aQ99PP6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC25.5■■□□□ 1.67
Trim34aQ99PP6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.5■■□□□ 1.67
Trim34aQ99PP6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
Trim34aQ99PP6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Trim34aQ99PP6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim34aQ99PP6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim34aQ99PP6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim34aQ99PP6 Gm6085-201ENSMUST00000182774 1470 ntBASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Spcs1-204ENSMUST00000226782 949 ntBASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Trim34aQ99PP6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.47■■□□□ 1.67
Trim34aQ99PP6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim34aQ99PP6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim34aQ99PP6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Trim34aQ99PP6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Trim34aQ99PP6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim34aQ99PP6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Trim34aQ99PP6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC25.45■■□□□ 1.66
Trim34aQ99PP6 Gm5874-201ENSMUST00000096101 508 ntBASIC25.45■■□□□ 1.66
Trim34aQ99PP6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim34aQ99PP6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim34aQ99PP6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC25.45■■□□□ 1.66
Trim34aQ99PP6 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.44■■□□□ 1.66
Trim34aQ99PP6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim34aQ99PP6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim34aQ99PP6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim34aQ99PP6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim34aQ99PP6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim34aQ99PP6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Trim34aQ99PP6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim34aQ99PP6 Gm26833-201ENSMUST00000180899 440 ntBASIC25.41■■□□□ 1.66
Trim34aQ99PP6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim34aQ99PP6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Trim34aQ99PP6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Trim34aQ99PP6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim34aQ99PP6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC25.4■■□□□ 1.66
Trim34aQ99PP6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
Trim34aQ99PP6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim34aQ99PP6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim34aQ99PP6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim34aQ99PP6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms