Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim8Q99PJ2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.06■□□□□ 0.8
Trim8Q99PJ2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim8Q99PJ2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim8Q99PJ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim8Q99PJ2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim8Q99PJ2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Golph3-202ENSMUST00000226517 2359 ntBASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.05■□□□□ 0.8
Trim8Q99PJ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim8Q99PJ2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.04■□□□□ 0.8
Trim8Q99PJ2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim8Q99PJ2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim8Q99PJ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim8Q99PJ2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim8Q99PJ2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim8Q99PJ2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim8Q99PJ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trim8Q99PJ2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim8Q99PJ2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20■□□□□ 0.79
Trim8Q99PJ2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim8Q99PJ2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim8Q99PJ2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim8Q99PJ2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim8Q99PJ2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim8Q99PJ2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 383.3 ms