Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.93■□□□□ 0.78
Msh4Q99MT2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.93■□□□□ 0.78
Msh4Q99MT2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh4Q99MT2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh4Q99MT2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh4Q99MT2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.93■□□□□ 0.78
Msh4Q99MT2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh4Q99MT2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Msh4Q99MT2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.92■□□□□ 0.78
Msh4Q99MT2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.92■□□□□ 0.78
Msh4Q99MT2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh4Q99MT2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh4Q99MT2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.9■□□□□ 0.78
Msh4Q99MT2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.9■□□□□ 0.78
Msh4Q99MT2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.9■□□□□ 0.78
Msh4Q99MT2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.9■□□□□ 0.78
Msh4Q99MT2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.9■□□□□ 0.78
Msh4Q99MT2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Msh4Q99MT2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Msh4Q99MT2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Msh4Q99MT2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh4Q99MT2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.89■□□□□ 0.77
Msh4Q99MT2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Msh4Q99MT2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Msh4Q99MT2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh4Q99MT2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh4Q99MT2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.87■□□□□ 0.77
Msh4Q99MT2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.87■□□□□ 0.77
Msh4Q99MT2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.87■□□□□ 0.77
Msh4Q99MT2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh4Q99MT2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh4Q99MT2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Msh4Q99MT2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.85■□□□□ 0.77
Msh4Q99MT2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msh4Q99MT2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.85■□□□□ 0.77
Msh4Q99MT2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.85■□□□□ 0.77
Msh4Q99MT2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh4Q99MT2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh4Q99MT2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh4Q99MT2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh4Q99MT2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh4Q99MT2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms