Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lims1Q99JW4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lims1Q99JW4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lims1Q99JW4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lims1Q99JW4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.8■□□□□ 0.6
Lims1Q99JW4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lims1Q99JW4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.79■□□□□ 0.6
Lims1Q99JW4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.79■□□□□ 0.6
Lims1Q99JW4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lims1Q99JW4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.78■□□□□ 0.6
Lims1Q99JW4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.78■□□□□ 0.6
Lims1Q99JW4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lims1Q99JW4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lims1Q99JW4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims1Q99JW4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.76■□□□□ 0.59
Lims1Q99JW4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lims1Q99JW4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lims1Q99JW4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lims1Q99JW4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lims1Q99JW4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lims1Q99JW4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.74■□□□□ 0.59
Lims1Q99JW4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lims1Q99JW4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lims1Q99JW4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lims1Q99JW4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lims1Q99JW4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lims1Q99JW4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lims1Q99JW4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms