Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.83■■□□□ 1.41
Rfc4Q99J62 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rfc4Q99J62 Gm12251-201ENSMUST00000117893 792 ntBASIC23.82■■□□□ 1.4
Rfc4Q99J62 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.82■■□□□ 1.4
Rfc4Q99J62 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfc4Q99J62 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Rfc4Q99J62 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfc4Q99J62 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rfc4Q99J62 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rfc4Q99J62 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.8■■□□□ 1.4
Rfc4Q99J62 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rfc4Q99J62 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Rfc4Q99J62 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rfc4Q99J62 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.8■■□□□ 1.4
Rfc4Q99J62 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.8■■□□□ 1.4
Rfc4Q99J62 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.79■■□□□ 1.4
Rfc4Q99J62 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Rfc4Q99J62 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rfc4Q99J62 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfc4Q99J62 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.77■■□□□ 1.4
Rfc4Q99J62 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfc4Q99J62 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rfc4Q99J62 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Gm26833-201ENSMUST00000180899 440 ntBASIC23.76■■□□□ 1.39
Rfc4Q99J62 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rfc4Q99J62 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rfc4Q99J62 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rfc4Q99J62 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.75■■□□□ 1.39
Rfc4Q99J62 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.75■■□□□ 1.39
Rfc4Q99J62 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rfc4Q99J62 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rfc4Q99J62 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rfc4Q99J62 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Rfc4Q99J62 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.73■■□□□ 1.39
Rfc4Q99J62 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Rfc4Q99J62 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rfc4Q99J62 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.72■■□□□ 1.39
Rfc4Q99J62 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.72■■□□□ 1.39
Rfc4Q99J62 Gm7291-201ENSMUST00000199147 382 ntBASIC23.72■■□□□ 1.39
Rfc4Q99J62 Gm43060-201ENSMUST00000200621 289 ntBASIC23.72■■□□□ 1.39
Rfc4Q99J62 Spcs1-204ENSMUST00000226782 949 ntBASIC23.72■■□□□ 1.39
Rfc4Q99J62 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfc4Q99J62 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfc4Q99J62 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rfc4Q99J62 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Rfc4Q99J62 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.72■■□□□ 1.39
Rfc4Q99J62 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Gm43530-201ENSMUST00000195920 274 ntBASIC23.71■■□□□ 1.39
Rfc4Q99J62 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
Rfc4Q99J62 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rfc4Q99J62 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rfc4Q99J62 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms