Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.04■□□□□ 0.48
Chmp1aQ921W0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.03■□□□□ 0.48
Chmp1aQ921W0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp1aQ921W0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp1aQ921W0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp1aQ921W0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chmp1aQ921W0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp1aQ921W0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chmp1aQ921W0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Chmp1aQ921W0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18■□□□□ 0.47
Chmp1aQ921W0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chmp1aQ921W0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18■□□□□ 0.47
Chmp1aQ921W0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Chmp1aQ921W0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp1aQ921W0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp1aQ921W0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp1aQ921W0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.98■□□□□ 0.47
Chmp1aQ921W0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Gm11687-201ENSMUST00000118911 886 ntBASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Iqck-206ENSMUST00000208658 2891 ntBASIC17.97■□□□□ 0.47
Chmp1aQ921W0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp1aQ921W0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp1aQ921W0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp1aQ921W0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms