Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha3Q91Y16 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha3Q91Y16 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha3Q91Y16 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha3Q91Y16 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha3Q91Y16 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha3Q91Y16 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha3Q91Y16 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.45■■□□□ 1.02
Pcdha3Q91Y16 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha3Q91Y16 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha3Q91Y16 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Pcdha3Q91Y16 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdha3Q91Y16 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdha3Q91Y16 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Pcdha3Q91Y16 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha3Q91Y16 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha3Q91Y16 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.4■■□□□ 1.02
Pcdha3Q91Y16 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Pcdha3Q91Y16 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Gm22238-201ENSMUST00000175222 88 ntBASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha3Q91Y16 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha3Q91Y16 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha3Q91Y16 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms