Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga11Q91XY8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga11Q91XY8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga11Q91XY8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Gm13238-201ENSMUST00000117655 780 ntBASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga11Q91XY8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga11Q91XY8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga11Q91XY8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga11Q91XY8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhga11Q91XY8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga11Q91XY8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Gm15820-201ENSMUST00000201566 728 ntBASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga11Q91XY8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga11Q91XY8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga11Q91XY8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.65■□□□□ 0.74
Pcdhga11Q91XY8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.65■□□□□ 0.74
Pcdhga11Q91XY8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga11Q91XY8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga11Q91XY8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhga11Q91XY8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhga11Q91XY8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhga11Q91XY8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms