Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga4Q91XY4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga4Q91XY4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga4Q91XY4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga4Q91XY4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga4Q91XY4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga4Q91XY4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.08■□□□□ 0.8
Pcdhga4Q91XY4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhga4Q91XY4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhga4Q91XY4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga4Q91XY4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga4Q91XY4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhga4Q91XY4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga4Q91XY4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhga4Q91XY4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhga4Q91XY4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhga4Q91XY4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms