Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.33■□□□□ 0.85
Pcdhga9Q91XX9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcdhga9Q91XX9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga9Q91XX9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.33■□□□□ 0.84
Pcdhga9Q91XX9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga9Q91XX9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga9Q91XX9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga9Q91XX9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhga9Q91XX9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhga9Q91XX9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhga9Q91XX9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga9Q91XX9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhga9Q91XX9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga9Q91XX9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga9Q91XX9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga9Q91XX9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga9Q91XX9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga9Q91XX9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga9Q91XX9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga9Q91XX9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga9Q91XX9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga9Q91XX9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms