Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 Gm9870-201ENSMUST00000063874 645 ntBASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Ttc39cQ8VE09 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Gm15039-201ENSMUST00000118914 875 ntBASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Gm21956-201ENSMUST00000179946 522 ntBASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ttc39cQ8VE09 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ttc39cQ8VE09 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ttc39cQ8VE09 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ttc39cQ8VE09 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ttc39cQ8VE09 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ttc39cQ8VE09 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.07■□□□□ 0.96
Ttc39cQ8VE09 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ttc39cQ8VE09 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ttc39cQ8VE09 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Gm7143-201ENSMUST00000222811 859 ntBASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
Ttc39cQ8VE09 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc39cQ8VE09 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc39cQ8VE09 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc39cQ8VE09 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc39cQ8VE09 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ttc39cQ8VE09 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc39cQ8VE09 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ttc39cQ8VE09 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Ttc39cQ8VE09 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms