Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rprd1aQ8VDS4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.12■□□□□ 0.97
Rprd1aQ8VDS4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.12■□□□□ 0.97
Rprd1aQ8VDS4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Rprd1aQ8VDS4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rprd1aQ8VDS4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rprd1aQ8VDS4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rprd1aQ8VDS4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rprd1aQ8VDS4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rprd1aQ8VDS4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rprd1aQ8VDS4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.08■□□□□ 0.97
Rprd1aQ8VDS4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rprd1aQ8VDS4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Gm9847-201ENSMUST00000052528 599 ntBASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rprd1aQ8VDS4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Gm12922-201ENSMUST00000120626 809 ntBASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rprd1aQ8VDS4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Gm7143-201ENSMUST00000222811 859 ntBASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rprd1aQ8VDS4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rprd1aQ8VDS4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rprd1aQ8VDS4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rprd1aQ8VDS4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rprd1aQ8VDS4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rprd1aQ8VDS4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms