Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a20aQ8VDB9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a20aQ8VDB9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a20aQ8VDB9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.25■□□□□ 0.83
Slc6a20aQ8VDB9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a20aQ8VDB9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a20aQ8VDB9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a20aQ8VDB9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a20aQ8VDB9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc6a20aQ8VDB9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms