Protein–RNA interactions for Protein: Q8VCC8

Rapgef3, Rap guanine nucleotide exchange factor 3, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef3Q8VCC8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Rapgef3Q8VCC8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rapgef3Q8VCC8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Rapgef3Q8VCC8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rapgef3Q8VCC8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rapgef3Q8VCC8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC28.76■■■□□ 2.19
Rapgef3Q8VCC8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC28.76■■■□□ 2.19
Rapgef3Q8VCC8 Mir7071-201ENSMUST00000184847 69 ntBASIC28.76■■■□□ 2.19
Rapgef3Q8VCC8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rapgef3Q8VCC8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Gm20760-201ENSMUST00000179197 648 ntBASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rapgef3Q8VCC8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 Gm6934-201ENSMUST00000194780 1905 ntBASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC28.74■■■□□ 2.19
Rapgef3Q8VCC8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC28.73■■■□□ 2.19
Rapgef3Q8VCC8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC28.73■■■□□ 2.19
Rapgef3Q8VCC8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rapgef3Q8VCC8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rapgef3Q8VCC8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rapgef3Q8VCC8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rapgef3Q8VCC8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rapgef3Q8VCC8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rapgef3Q8VCC8 AC158538.1-201ENSMUST00000225870 294 ntBASIC28.72■■■□□ 2.19
Rapgef3Q8VCC8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Rapgef3Q8VCC8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
Rapgef3Q8VCC8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rapgef3Q8VCC8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rapgef3Q8VCC8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rapgef3Q8VCC8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Gm4968-201ENSMUST00000071458 858 ntBASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rapgef3Q8VCC8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rapgef3Q8VCC8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rapgef3Q8VCC8 Gm7977-201ENSMUST00000193787 748 ntBASIC28.67■■■□□ 2.18
Rapgef3Q8VCC8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rapgef3Q8VCC8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rapgef3Q8VCC8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Gm8520-201ENSMUST00000186517 868 ntBASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
Rapgef3Q8VCC8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Gm11421-201ENSMUST00000122124 294 ntBASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rapgef3Q8VCC8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Gm9988-201ENSMUST00000069786 435 ntBASIC28.64■■■□□ 2.18
Rapgef3Q8VCC8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Rapgef3Q8VCC8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.63■■■□□ 2.17
Rapgef3Q8VCC8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 Gm12527-201ENSMUST00000117967 564 ntBASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rapgef3Q8VCC8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rapgef3Q8VCC8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC28.61■■■□□ 2.17
Rapgef3Q8VCC8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rapgef3Q8VCC8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms