Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3kbp1Q8R550 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.13■□□□□ 0.97
Sh3kbp1Q8R550 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3kbp1Q8R550 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3kbp1Q8R550 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3kbp1Q8R550 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3kbp1Q8R550 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Golgb1-201ENSMUST00000023534 498 ntBASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3kbp1Q8R550 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3kbp1Q8R550 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3kbp1Q8R550 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3kbp1Q8R550 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Notumos-201ENSMUST00000151998 2659 ntBASIC21.06■□□□□ 0.96
Sh3kbp1Q8R550 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Sh3kbp1Q8R550 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.05■□□□□ 0.96
Sh3kbp1Q8R550 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3kbp1Q8R550 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.05■□□□□ 0.96
Sh3kbp1Q8R550 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Gm27454-201ENSMUST00000185090 204 ntBASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3kbp1Q8R550 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms