Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ushbp1Q8R370 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ushbp1Q8R370 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.02■■□□□ 1.28
Ushbp1Q8R370 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ushbp1Q8R370 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23■■□□□ 1.27
Ushbp1Q8R370 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ushbp1Q8R370 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ushbp1Q8R370 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.99■■□□□ 1.27
Ushbp1Q8R370 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ushbp1Q8R370 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ushbp1Q8R370 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ushbp1Q8R370 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.97■■□□□ 1.27
Ushbp1Q8R370 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.96■■□□□ 1.27
Ushbp1Q8R370 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ushbp1Q8R370 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.96■■□□□ 1.27
Ushbp1Q8R370 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ushbp1Q8R370 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ushbp1Q8R370 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.96■■□□□ 1.27
Ushbp1Q8R370 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ushbp1Q8R370 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.95■■□□□ 1.26
Ushbp1Q8R370 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.95■■□□□ 1.26
Ushbp1Q8R370 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ushbp1Q8R370 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ushbp1Q8R370 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ushbp1Q8R370 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ushbp1Q8R370 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.94■■□□□ 1.26
Ushbp1Q8R370 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.94■■□□□ 1.26
Ushbp1Q8R370 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ushbp1Q8R370 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ushbp1Q8R370 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ushbp1Q8R370 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ushbp1Q8R370 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ushbp1Q8R370 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ushbp1Q8R370 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ushbp1Q8R370 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ushbp1Q8R370 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ushbp1Q8R370 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.91■■□□□ 1.26
Ushbp1Q8R370 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms