Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrc42Q8R2U7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrc42Q8R2U7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lrrc42Q8R2U7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.28■■□□□ 1
Lrrc42Q8R2U7 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrc42Q8R2U7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.27■■□□□ 1
Lrrc42Q8R2U7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Lrrc42Q8R2U7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrrc42Q8R2U7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc42Q8R2U7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.25■□□□□ 0.99
Lrrc42Q8R2U7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.25■□□□□ 0.99
Lrrc42Q8R2U7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc42Q8R2U7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrc42Q8R2U7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lrrc42Q8R2U7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Lrrc42Q8R2U7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Gm10399-202ENSMUST00000202768 748 ntBASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrc42Q8R2U7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms