Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl47Q8K2Y7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl47Q8K2Y7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrpl47Q8K2Y7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Mrpl47Q8K2Y7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrpl47Q8K2Y7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrpl47Q8K2Y7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mrpl47Q8K2Y7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.33■□□□□ 0.85
Mrpl47Q8K2Y7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.33■□□□□ 0.84
Mrpl47Q8K2Y7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mrpl47Q8K2Y7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.33■□□□□ 0.84
Mrpl47Q8K2Y7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Mrpl47Q8K2Y7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Mrpl47Q8K2Y7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl47Q8K2Y7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl47Q8K2Y7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl47Q8K2Y7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl47Q8K2Y7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl47Q8K2Y7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrpl47Q8K2Y7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Mrpl47Q8K2Y7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrpl47Q8K2Y7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Mrpl47Q8K2Y7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl47Q8K2Y7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl47Q8K2Y7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrpl47Q8K2Y7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms