Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Scamp1Q8K021 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.1■□□□□ 0.81
Scamp1Q8K021 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Scamp1Q8K021 Gm12821-201ENSMUST00000120022 600 ntBASIC20.09■□□□□ 0.81
Scamp1Q8K021 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scamp1Q8K021 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.09■□□□□ 0.81
Scamp1Q8K021 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Scamp1Q8K021 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Scamp1Q8K021 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Scamp1Q8K021 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scamp1Q8K021 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.08■□□□□ 0.8
Scamp1Q8K021 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scamp1Q8K021 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scamp1Q8K021 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scamp1Q8K021 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scamp1Q8K021 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scamp1Q8K021 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.05■□□□□ 0.8
Scamp1Q8K021 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scamp1Q8K021 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.04■□□□□ 0.8
Scamp1Q8K021 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scamp1Q8K021 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scamp1Q8K021 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scamp1Q8K021 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.02■□□□□ 0.8
Scamp1Q8K021 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Scamp1Q8K021 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Scamp1Q8K021 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scamp1Q8K021 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.01■□□□□ 0.79
Scamp1Q8K021 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.01■□□□□ 0.79
Scamp1Q8K021 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.01■□□□□ 0.79
Scamp1Q8K021 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scamp1Q8K021 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms