Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx6Q8C7R7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx6Q8C7R7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rfx6Q8C7R7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Rfx6Q8C7R7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx6Q8C7R7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx6Q8C7R7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx6Q8C7R7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx6Q8C7R7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx6Q8C7R7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx6Q8C7R7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx6Q8C7R7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx6Q8C7R7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx6Q8C7R7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfx6Q8C7R7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms