Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col6a6Q8C6K9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col6a6Q8C6K9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col6a6Q8C6K9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 AV356131-201ENSMUST00000206201 750 ntBASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col6a6Q8C6K9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col6a6Q8C6K9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col6a6Q8C6K9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Col6a6Q8C6K9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col6a6Q8C6K9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col6a6Q8C6K9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col6a6Q8C6K9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.63■□□□□ 0.57
Col6a6Q8C6K9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col6a6Q8C6K9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col6a6Q8C6K9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col6a6Q8C6K9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col6a6Q8C6K9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a6Q8C6K9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.6■□□□□ 0.57
Col6a6Q8C6K9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a6Q8C6K9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a6Q8C6K9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Col6a6Q8C6K9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a6Q8C6K9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Col6a6Q8C6K9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col6a6Q8C6K9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a6Q8C6K9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a6Q8C6K9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms