Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ska3Q8C263 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.3■□□□□ 0.68
Ska3Q8C263 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Ska3Q8C263 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.3■□□□□ 0.68
Ska3Q8C263 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.29■□□□□ 0.68
Ska3Q8C263 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.29■□□□□ 0.68
Ska3Q8C263 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ska3Q8C263 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska3Q8C263 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska3Q8C263 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ska3Q8C263 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska3Q8C263 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ska3Q8C263 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Ska3Q8C263 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.27■□□□□ 0.68
Ska3Q8C263 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska3Q8C263 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ska3Q8C263 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ska3Q8C263 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska3Q8C263 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ska3Q8C263 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Ska3Q8C263 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.25■□□□□ 0.67
Ska3Q8C263 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
Ska3Q8C263 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.25■□□□□ 0.67
Ska3Q8C263 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ska3Q8C263 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
Ska3Q8C263 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.24■□□□□ 0.67
Ska3Q8C263 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska3Q8C263 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
Ska3Q8C263 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska3Q8C263 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska3Q8C263 Gm22238-201ENSMUST00000175222 88 ntBASIC19.23■□□□□ 0.67
Ska3Q8C263 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska3Q8C263 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska3Q8C263 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.22■□□□□ 0.67
Ska3Q8C263 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.22■□□□□ 0.67
Ska3Q8C263 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ska3Q8C263 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ska3Q8C263 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.22■□□□□ 0.67
Ska3Q8C263 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska3Q8C263 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Ska3Q8C263 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska3Q8C263 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Ska3Q8C263 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska3Q8C263 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ska3Q8C263 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska3Q8C263 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska3Q8C263 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ska3Q8C263 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.21■□□□□ 0.67
Ska3Q8C263 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ska3Q8C263 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ska3Q8C263 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
Ska3Q8C263 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ska3Q8C263 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ska3Q8C263 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ska3Q8C263 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ska3Q8C263 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ska3Q8C263 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms