Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC28.43■■■□□ 2.14
Cps1Q8C196 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cps1Q8C196 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cps1Q8C196 Gm42569-201ENSMUST00000200539 472 ntBASIC28.42■■■□□ 2.14
Cps1Q8C196 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cps1Q8C196 Smad6-203ENSMUST00000179458 273 ntBASIC28.41■■■□□ 2.14
Cps1Q8C196 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cps1Q8C196 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Cps1Q8C196 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cps1Q8C196 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cps1Q8C196 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cps1Q8C196 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC28.39■■■□□ 2.14
Cps1Q8C196 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC28.39■■■□□ 2.14
Cps1Q8C196 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC28.39■■■□□ 2.14
Cps1Q8C196 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cps1Q8C196 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Cps1Q8C196 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cps1Q8C196 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cps1Q8C196 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC28.38■■■□□ 2.13
Cps1Q8C196 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cps1Q8C196 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cps1Q8C196 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cps1Q8C196 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC28.38■■■□□ 2.13
Cps1Q8C196 Gm10209-201ENSMUST00000203397 1607 ntBASIC28.38■■■□□ 2.13
Cps1Q8C196 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cps1Q8C196 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC28.37■■■□□ 2.13
Cps1Q8C196 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC28.37■■■□□ 2.13
Cps1Q8C196 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC28.37■■■□□ 2.13
Cps1Q8C196 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Cps1Q8C196 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
Cps1Q8C196 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC28.36■■■□□ 2.13
Cps1Q8C196 Gm10033-202ENSMUST00000211874 928 ntBASIC28.36■■■□□ 2.13
Cps1Q8C196 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cps1Q8C196 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cps1Q8C196 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC28.33■■■□□ 2.13
Cps1Q8C196 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cps1Q8C196 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cps1Q8C196 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Cps1Q8C196 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cps1Q8C196 AC165080.2-201ENSMUST00000217491 1530 ntBASIC28.32■■■□□ 2.12
Cps1Q8C196 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Cps1Q8C196 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Cps1Q8C196 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC28.31■■■□□ 2.12
Cps1Q8C196 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC28.31■■■□□ 2.12
Cps1Q8C196 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cps1Q8C196 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Cps1Q8C196 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC28.3■■■□□ 2.12
Cps1Q8C196 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cps1Q8C196 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC28.3■■■□□ 2.12
Cps1Q8C196 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cps1Q8C196 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Cps1Q8C196 Gm27011-201ENSMUST00000182352 972 ntBASIC28.29■■■□□ 2.12
Cps1Q8C196 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Cps1Q8C196 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC28.29■■■□□ 2.12
Cps1Q8C196 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC28.29■■■□□ 2.12
Cps1Q8C196 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Cps1Q8C196 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Cps1Q8C196 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC28.28■■■□□ 2.12
Cps1Q8C196 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC28.28■■■□□ 2.12
Cps1Q8C196 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Cps1Q8C196 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cps1Q8C196 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC28.27■■■□□ 2.12
Cps1Q8C196 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cps1Q8C196 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cps1Q8C196 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Cps1Q8C196 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cps1Q8C196 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
Cps1Q8C196 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cps1Q8C196 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Cps1Q8C196 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cps1Q8C196 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cps1Q8C196 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cps1Q8C196 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cps1Q8C196 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC28.23■■■□□ 2.11
Cps1Q8C196 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cps1Q8C196 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms