Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd9Q8BYH8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd9Q8BYH8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd9Q8BYH8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd9Q8BYH8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chd9Q8BYH8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd9Q8BYH8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Gm42778-201ENSMUST00000199644 553 ntBASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd9Q8BYH8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chd9Q8BYH8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.46■□□□□ 0.23
Chd9Q8BYH8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chd9Q8BYH8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.44■□□□□ 0.22
Chd9Q8BYH8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chd9Q8BYH8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd9Q8BYH8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd9Q8BYH8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd9Q8BYH8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd9Q8BYH8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd9Q8BYH8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms