Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cpne3Q8BT60 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Gm45444-201ENSMUST00000211394 898 ntBASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cpne3Q8BT60 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cpne3Q8BT60 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cpne3Q8BT60 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cpne3Q8BT60 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cpne3Q8BT60 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.69■□□□□ 0.74
Cpne3Q8BT60 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cpne3Q8BT60 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne3Q8BT60 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cpne3Q8BT60 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cpne3Q8BT60 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.67■□□□□ 0.74
Cpne3Q8BT60 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms