Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.77■□□□□ 0.6
Rhbdd3Q8BP97 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rhbdd3Q8BP97 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rhbdd3Q8BP97 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rhbdd3Q8BP97 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rhbdd3Q8BP97 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rhbdd3Q8BP97 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rhbdd3Q8BP97 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rhbdd3Q8BP97 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rhbdd3Q8BP97 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Gm13238-201ENSMUST00000117655 780 ntBASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rhbdd3Q8BP97 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rhbdd3Q8BP97 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Gm45444-201ENSMUST00000211394 898 ntBASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rhbdd3Q8BP97 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rhbdd3Q8BP97 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rhbdd3Q8BP97 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rhbdd3Q8BP97 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rhbdd3Q8BP97 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms