Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf18Q8BM39 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf18Q8BM39 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Prpf18Q8BM39 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Gm7332-201ENSMUST00000118351 454 ntBASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Gm12366-201ENSMUST00000121722 873 ntBASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Gm5786-201ENSMUST00000085368 882 ntBASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf18Q8BM39 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf18Q8BM39 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf18Q8BM39 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf18Q8BM39 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf18Q8BM39 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf18Q8BM39 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf18Q8BM39 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf18Q8BM39 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Golph3-202ENSMUST00000226517 2359 ntBASIC19.32■□□□□ 0.68
Prpf18Q8BM39 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf18Q8BM39 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms