Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf38Q8BI21 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Iqck-206ENSMUST00000208658 2891 ntBASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf38Q8BI21 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf38Q8BI21 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf38Q8BI21 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.78■□□□□ 0.76
Rnf38Q8BI21 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf38Q8BI21 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf38Q8BI21 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf38Q8BI21 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf38Q8BI21 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
Rnf38Q8BI21 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf38Q8BI21 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf38Q8BI21 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms