Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1bQ8BH88 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.27■■□□□ 1.16
Depdc1bQ8BH88 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1bQ8BH88 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.25■■□□□ 1.15
Depdc1bQ8BH88 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1bQ8BH88 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.23■■□□□ 1.15
Depdc1bQ8BH88 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1bQ8BH88 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1bQ8BH88 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1bQ8BH88 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1bQ8BH88 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Gm40881-201ENSMUST00000223397 166 ntBASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1bQ8BH88 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Depdc1bQ8BH88 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
Depdc1bQ8BH88 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1bQ8BH88 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Depdc1bQ8BH88 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 Gm10399-202ENSMUST00000202768 748 ntBASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.17■■□□□ 1.14
Depdc1bQ8BH88 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1bQ8BH88 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Depdc1bQ8BH88 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 510.3 ms