Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc5a7Q8BGY9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc5a7Q8BGY9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc5a7Q8BGY9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc5a7Q8BGY9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc5a7Q8BGY9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc5a7Q8BGY9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc5a7Q8BGY9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc5a7Q8BGY9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc5a7Q8BGY9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc5a7Q8BGY9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Slc5a7Q8BGY9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc5a7Q8BGY9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc5a7Q8BGY9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc5a7Q8BGY9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc5a7Q8BGY9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc5a7Q8BGY9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc5a7Q8BGY9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Gm8503-201ENSMUST00000118131 455 ntBASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc5a7Q8BGY9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc5a7Q8BGY9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc5a7Q8BGY9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc5a7Q8BGY9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc5a7Q8BGY9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc5a7Q8BGY9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc5a7Q8BGY9 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.93■□□□□ 0.46
Slc5a7Q8BGY9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc5a7Q8BGY9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc5a7Q8BGY9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc5a7Q8BGY9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms