Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.52■□□□□ 0.4
Ttc28Q80XJ3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ttc28Q80XJ3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.52■□□□□ 0.39
Ttc28Q80XJ3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ttc28Q80XJ3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc28Q80XJ3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.51■□□□□ 0.39
Ttc28Q80XJ3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ttc28Q80XJ3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.51■□□□□ 0.39
Ttc28Q80XJ3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ttc28Q80XJ3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ttc28Q80XJ3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ttc28Q80XJ3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ttc28Q80XJ3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc28Q80XJ3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ttc28Q80XJ3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.47■□□□□ 0.39
Ttc28Q80XJ3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Ttc28Q80XJ3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ttc28Q80XJ3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Gm12933-201ENSMUST00000120203 872 ntBASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Gm22325-201ENSMUST00000158904 308 ntBASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ttc28Q80XJ3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ttc28Q80XJ3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ttc28Q80XJ3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.44■□□□□ 0.38
Ttc28Q80XJ3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ttc28Q80XJ3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ttc28Q80XJ3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ttc28Q80XJ3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ttc28Q80XJ3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Gm18671-201ENSMUST00000214826 683 ntBASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ttc28Q80XJ3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ttc28Q80XJ3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms