Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.61■□□□□ 0.73
Vrk1Q80X41 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Gm8495-201ENSMUST00000188740 694 ntBASIC19.61■□□□□ 0.73
Vrk1Q80X41 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vrk1Q80X41 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vrk1Q80X41 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vrk1Q80X41 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Gm18284-201ENSMUST00000172604 624 ntBASIC19.59■□□□□ 0.73
Vrk1Q80X41 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vrk1Q80X41 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.58■□□□□ 0.73
Vrk1Q80X41 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vrk1Q80X41 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vrk1Q80X41 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.58■□□□□ 0.72
Vrk1Q80X41 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.58■□□□□ 0.72
Vrk1Q80X41 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vrk1Q80X41 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Vrk1Q80X41 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.57■□□□□ 0.72
Vrk1Q80X41 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.57■□□□□ 0.72
Vrk1Q80X41 Gm8493-201ENSMUST00000196881 489 ntBASIC19.57■□□□□ 0.72
Vrk1Q80X41 Gm43017-201ENSMUST00000198296 752 ntBASIC19.57■□□□□ 0.72
Vrk1Q80X41 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.57■□□□□ 0.72
Vrk1Q80X41 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.56■□□□□ 0.72
Vrk1Q80X41 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Vrk1Q80X41 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.55■□□□□ 0.72
Vrk1Q80X41 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vrk1Q80X41 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vrk1Q80X41 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vrk1Q80X41 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Vrk1Q80X41 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Vrk1Q80X41 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms