Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Ush1gQ80T11 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.51■■□□□ 1.19
Ush1gQ80T11 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.51■■□□□ 1.19
Ush1gQ80T11 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ush1gQ80T11 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Gm43137-201ENSMUST00000198052 594 ntBASIC22.5■■□□□ 1.19
Ush1gQ80T11 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ush1gQ80T11 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.49■■□□□ 1.19
Ush1gQ80T11 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ush1gQ80T11 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
Ush1gQ80T11 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.47■■□□□ 1.19
Ush1gQ80T11 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Ush1gQ80T11 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Ush1gQ80T11 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ush1gQ80T11 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ush1gQ80T11 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ush1gQ80T11 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Mir7075-201ENSMUST00000184187 82 ntBASIC22.46■■□□□ 1.19
Ush1gQ80T11 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ush1gQ80T11 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ush1gQ80T11 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Ush1gQ80T11 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ush1gQ80T11 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ush1gQ80T11 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ush1gQ80T11 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ush1gQ80T11 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ush1gQ80T11 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ush1gQ80T11 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ush1gQ80T11 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms