Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Otub1Q7TQI3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otub1Q7TQI3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otub1Q7TQI3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otub1Q7TQI3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otub1Q7TQI3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otub1Q7TQI3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.44■□□□□ 0.7
Otub1Q7TQI3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otub1Q7TQI3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otub1Q7TQI3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Otub1Q7TQI3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otub1Q7TQI3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otub1Q7TQI3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Otub1Q7TQI3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Otub1Q7TQI3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Otub1Q7TQI3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Otub1Q7TQI3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Otub1Q7TQI3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Otub1Q7TQI3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Otub1Q7TQI3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Otub1Q7TQI3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Otub1Q7TQI3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Otub1Q7TQI3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Otub1Q7TQI3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms