Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx4Q7TNK1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx4Q7TNK1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rfx4Q7TNK1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx4Q7TNK1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx4Q7TNK1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx4Q7TNK1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx4Q7TNK1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx4Q7TNK1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx4Q7TNK1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx4Q7TNK1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx4Q7TNK1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfx4Q7TNK1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Rfx4Q7TNK1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rfx4Q7TNK1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx4Q7TNK1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx4Q7TNK1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx4Q7TNK1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx4Q7TNK1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfx4Q7TNK1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Rfx4Q7TNK1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfx4Q7TNK1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfx4Q7TNK1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms