Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cspg5Q71M36 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Gm8495-201ENSMUST00000188740 694 ntBASIC21.16■□□□□ 0.98
Cspg5Q71M36 Gm43017-201ENSMUST00000198296 752 ntBASIC21.16■□□□□ 0.98
Cspg5Q71M36 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg5Q71M36 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg5Q71M36 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg5Q71M36 Gm18284-201ENSMUST00000172604 624 ntBASIC21.15■□□□□ 0.98
Cspg5Q71M36 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.15■□□□□ 0.98
Cspg5Q71M36 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.15■□□□□ 0.98
Cspg5Q71M36 Gm43137-201ENSMUST00000198052 594 ntBASIC21.15■□□□□ 0.98
Cspg5Q71M36 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg5Q71M36 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cspg5Q71M36 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg5Q71M36 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cspg5Q71M36 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cspg5Q71M36 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Cspg5Q71M36 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cspg5Q71M36 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg5Q71M36 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.13■□□□□ 0.97
Cspg5Q71M36 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.13■□□□□ 0.97
Cspg5Q71M36 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.13■□□□□ 0.97
Cspg5Q71M36 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg5Q71M36 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg5Q71M36 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg5Q71M36 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.12■□□□□ 0.97
Cspg5Q71M36 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg5Q71M36 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg5Q71M36 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg5Q71M36 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg5Q71M36 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg5Q71M36 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg5Q71M36 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg5Q71M36 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg5Q71M36 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cspg5Q71M36 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cspg5Q71M36 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cspg5Q71M36 Gm6139-201ENSMUST00000079261 882 ntBASIC21.09■□□□□ 0.97
Cspg5Q71M36 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg5Q71M36 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg5Q71M36 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cspg5Q71M36 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cspg5Q71M36 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.08■□□□□ 0.97
Cspg5Q71M36 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cspg5Q71M36 Mir7075-201ENSMUST00000184187 82 ntBASIC21.08■□□□□ 0.97
Cspg5Q71M36 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cspg5Q71M36 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cspg5Q71M36 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cspg5Q71M36 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.07■□□□□ 0.96
Cspg5Q71M36 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg5Q71M36 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.07■□□□□ 0.96
Cspg5Q71M36 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg5Q71M36 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cspg5Q71M36 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg5Q71M36 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.05■□□□□ 0.96
Cspg5Q71M36 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms