Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rif1Q6PR54 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rif1Q6PR54 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Gm21362-201ENSMUST00000194272 928 ntBASIC17.56■□□□□ 0.4
Rif1Q6PR54 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rif1Q6PR54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rif1Q6PR54 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.55■□□□□ 0.4
Rif1Q6PR54 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rif1Q6PR54 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.55■□□□□ 0.4
Rif1Q6PR54 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rif1Q6PR54 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rif1Q6PR54 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rif1Q6PR54 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rif1Q6PR54 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rif1Q6PR54 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rif1Q6PR54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.53■□□□□ 0.4
Rif1Q6PR54 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.53■□□□□ 0.4
Rif1Q6PR54 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.53■□□□□ 0.4
Rif1Q6PR54 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rif1Q6PR54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rif1Q6PR54 Gm13148-201ENSMUST00000118892 745 ntBASIC17.53■□□□□ 0.4
Rif1Q6PR54 Mir5133-201ENSMUST00000174955 77 ntBASIC17.53■□□□□ 0.4
Rif1Q6PR54 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rif1Q6PR54 Gm27741-201ENSMUST00000185060 237 ntBASIC17.52■□□□□ 0.4
Rif1Q6PR54 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rif1Q6PR54 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rif1Q6PR54 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rif1Q6PR54 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rif1Q6PR54 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rif1Q6PR54 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rif1Q6PR54 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rif1Q6PR54 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rif1Q6PR54 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.49■□□□□ 0.39
Rif1Q6PR54 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rif1Q6PR54 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rif1Q6PR54 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rif1Q6PR54 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rif1Q6PR54 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rif1Q6PR54 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rif1Q6PR54 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rif1Q6PR54 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rif1Q6PR54 Gm11643-201ENSMUST00000119578 864 ntBASIC17.48■□□□□ 0.39
Rif1Q6PR54 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rif1Q6PR54 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rif1Q6PR54 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.46■□□□□ 0.39
Rif1Q6PR54 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.46■□□□□ 0.39
Rif1Q6PR54 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rif1Q6PR54 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.46■□□□□ 0.38
Rif1Q6PR54 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Rif1Q6PR54 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rif1Q6PR54 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rif1Q6PR54 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rif1Q6PR54 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rif1Q6PR54 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rif1Q6PR54 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms