Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 Gm7143-201ENSMUST00000222811 859 ntBASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.72■□□□□ 0.91
Nudcd1Q6PIP5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nudcd1Q6PIP5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nudcd1Q6PIP5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Nudcd1Q6PIP5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nudcd1Q6PIP5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.7■□□□□ 0.9
Nudcd1Q6PIP5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.69■□□□□ 0.9
Nudcd1Q6PIP5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd1Q6PIP5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Nudcd1Q6PIP5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.66■□□□□ 0.9
Nudcd1Q6PIP5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd1Q6PIP5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nudcd1Q6PIP5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Nudcd1Q6PIP5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nudcd1Q6PIP5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Gm45417-201ENSMUST00000209533 758 ntBASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd1Q6PIP5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Nudcd1Q6PIP5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd1Q6PIP5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nudcd1Q6PIP5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd1Q6PIP5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd1Q6PIP5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd1Q6PIP5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd1Q6PIP5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd1Q6PIP5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Nudcd1Q6PIP5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nudcd1Q6PIP5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nudcd1Q6PIP5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms