Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc36Q6PDM4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc36Q6PDM4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc36Q6PDM4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.33■□□□□ 0.37
Ccdc36Q6PDM4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc36Q6PDM4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc36Q6PDM4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Gm27502-201ENSMUST00000183495 199 ntBASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc36Q6PDM4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc36Q6PDM4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
Ccdc36Q6PDM4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.29■□□□□ 0.36
Ccdc36Q6PDM4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Gm14523-201ENSMUST00000117260 558 ntBASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc36Q6PDM4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc36Q6PDM4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms