Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shkbp1Q6P7W2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shkbp1Q6P7W2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shkbp1Q6P7W2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Gm18284-201ENSMUST00000172604 624 ntBASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shkbp1Q6P7W2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Gm43173-201ENSMUST00000202246 593 ntBASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shkbp1Q6P7W2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Gm8495-201ENSMUST00000188740 694 ntBASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Shkbp1Q6P7W2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shkbp1Q6P7W2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Shkbp1Q6P7W2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shkbp1Q6P7W2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Shkbp1Q6P7W2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shkbp1Q6P7W2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Shkbp1Q6P7W2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shkbp1Q6P7W2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shkbp1Q6P7W2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Shkbp1Q6P7W2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Shkbp1Q6P7W2 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shkbp1Q6P7W2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shkbp1Q6P7W2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.51■■□□□ 1.03
Shkbp1Q6P7W2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Spcs1-204ENSMUST00000226782 949 ntBASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Shkbp1Q6P7W2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shkbp1Q6P7W2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Shkbp1Q6P7W2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms