Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf6Q6NVF9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Cpsf6Q6NVF9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf6Q6NVF9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf6Q6NVF9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpsf6Q6NVF9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf6Q6NVF9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cpsf6Q6NVF9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cpsf6Q6NVF9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.88■□□□□ 0.77
Cpsf6Q6NVF9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf6Q6NVF9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf6Q6NVF9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.86■□□□□ 0.77
Cpsf6Q6NVF9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.86■□□□□ 0.77
Cpsf6Q6NVF9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf6Q6NVF9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf6Q6NVF9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf6Q6NVF9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf6Q6NVF9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf6Q6NVF9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.83■□□□□ 0.77
Cpsf6Q6NVF9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf6Q6NVF9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.83■□□□□ 0.76
Cpsf6Q6NVF9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf6Q6NVF9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf6Q6NVF9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf6Q6NVF9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf6Q6NVF9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms