Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Krt42Q6IFX2 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.14■□□□□ 0.98
Krt42Q6IFX2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.14■□□□□ 0.97
Krt42Q6IFX2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.14■□□□□ 0.97
Krt42Q6IFX2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.14■□□□□ 0.97
Krt42Q6IFX2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Krt42Q6IFX2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Gm11599-201ENSMUST00000118720 878 ntBASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Krt42Q6IFX2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Krt42Q6IFX2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Krt42Q6IFX2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Krt42Q6IFX2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Krt42Q6IFX2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Krt42Q6IFX2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt42Q6IFX2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Krt42Q6IFX2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Krt42Q6IFX2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Krt42Q6IFX2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Krt42Q6IFX2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Krt42Q6IFX2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Krt42Q6IFX2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Krt42Q6IFX2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms