Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rpa2Q62193 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpa2Q62193 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rpa2Q62193 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpa2Q62193 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpa2Q62193 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpa2Q62193 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
Rpa2Q62193 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpa2Q62193 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.82■□□□□ 0.6
Rpa2Q62193 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpa2Q62193 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpa2Q62193 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.82■□□□□ 0.6
Rpa2Q62193 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpa2Q62193 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.82■□□□□ 0.6
Rpa2Q62193 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpa2Q62193 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rpa2Q62193 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rpa2Q62193 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpa2Q62193 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpa2Q62193 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.81■□□□□ 0.6
Rpa2Q62193 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpa2Q62193 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpa2Q62193 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpa2Q62193 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpa2Q62193 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.8■□□□□ 0.6
Rpa2Q62193 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.8■□□□□ 0.6
Rpa2Q62193 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.8■□□□□ 0.6
Rpa2Q62193 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpa2Q62193 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpa2Q62193 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rpa2Q62193 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpa2Q62193 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpa2Q62193 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.78■□□□□ 0.6
Rpa2Q62193 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpa2Q62193 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpa2Q62193 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpa2Q62193 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa2Q62193 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.77■□□□□ 0.6
Rpa2Q62193 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.77■□□□□ 0.6
Rpa2Q62193 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa2Q62193 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa2Q62193 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpa2Q62193 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpa2Q62193 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpa2Q62193 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rpa2Q62193 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpa2Q62193 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rpa2Q62193 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpa2Q62193 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Rpa2Q62193 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.75■□□□□ 0.59
Rpa2Q62193 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.75■□□□□ 0.59
Rpa2Q62193 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpa2Q62193 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa2Q62193 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rpa2Q62193 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa2Q62193 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.74■□□□□ 0.59
Rpa2Q62193 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpa2Q62193 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.73■□□□□ 0.59
Rpa2Q62193 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.73■□□□□ 0.59
Rpa2Q62193 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpa2Q62193 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rpa2Q62193 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms