Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd47Q61735 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cd47Q61735 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd47Q61735 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd47Q61735 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd47Q61735 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd47Q61735 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd47Q61735 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.61■□□□□ 0.57
Cd47Q61735 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Gm45444-201ENSMUST00000211394 898 ntBASIC18.61■□□□□ 0.57
Cd47Q61735 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cd47Q61735 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cd47Q61735 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd47Q61735 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.6■□□□□ 0.57
Cd47Q61735 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.6■□□□□ 0.57
Cd47Q61735 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.6■□□□□ 0.57
Cd47Q61735 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.6■□□□□ 0.57
Cd47Q61735 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cd47Q61735 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd47Q61735 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cd47Q61735 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cd47Q61735 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.59■□□□□ 0.57
Cd47Q61735 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cd47Q61735 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd47Q61735 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd47Q61735 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd47Q61735 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.58■□□□□ 0.57
Cd47Q61735 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd47Q61735 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd47Q61735 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cd47Q61735 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cd47Q61735 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd47Q61735 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd47Q61735 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd47Q61735 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd47Q61735 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd47Q61735 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cd47Q61735 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cd47Q61735 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cd47Q61735 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd47Q61735 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cd47Q61735 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cd47Q61735 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.56■□□□□ 0.56
Cd47Q61735 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.56■□□□□ 0.56
Cd47Q61735 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd47Q61735 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cd47Q61735 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.55■□□□□ 0.56
Cd47Q61735 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd47Q61735 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.55■□□□□ 0.56
Cd47Q61735 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.55■□□□□ 0.56
Cd47Q61735 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cd47Q61735 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms