Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Gm37444-201ENSMUST00000193605 439 ntBASIC14.94□□□□□ -0.02
Foxc1Q61572 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.94□□□□□ -0.02
Foxc1Q61572 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.94□□□□□ -0.02
Foxc1Q61572 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Foxc1Q61572 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxc1Q61572 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Foxc1Q61572 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Foxc1Q61572 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxc1Q61572 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Foxc1Q61572 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.93□□□□□ -0.02
Foxc1Q61572 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Foxc1Q61572 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxc1Q61572 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.92□□□□□ -0.02
Foxc1Q61572 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Foxc1Q61572 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.92□□□□□ -0.02
Foxc1Q61572 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.92□□□□□ -0.02
Foxc1Q61572 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.92□□□□□ -0.02
Foxc1Q61572 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Foxc1Q61572 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Foxc1Q61572 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.92□□□□□ -0.02
Foxc1Q61572 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.91□□□□□ -0.02
Foxc1Q61572 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxc1Q61572 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.91□□□□□ -0.02
Foxc1Q61572 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxc1Q61572 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Foxc1Q61572 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Foxc1Q61572 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Foxc1Q61572 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxc1Q61572 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.9□□□□□ -0.02
Foxc1Q61572 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.9□□□□□ -0.02
Foxc1Q61572 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxc1Q61572 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxc1Q61572 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Foxc1Q61572 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.9□□□□□ -0.02
Foxc1Q61572 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.89□□□□□ -0.03
Foxc1Q61572 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxc1Q61572 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.89□□□□□ -0.03
Foxc1Q61572 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.89□□□□□ -0.03
Foxc1Q61572 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Foxc1Q61572 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Foxc1Q61572 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Foxc1Q61572 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.88□□□□□ -0.03
Foxc1Q61572 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.88□□□□□ -0.03
Foxc1Q61572 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Foxc1Q61572 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Foxc1Q61572 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Foxc1Q61572 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.86□□□□□ -0.03
Foxc1Q61572 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Foxc1Q61572 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.86□□□□□ -0.03
Foxc1Q61572 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Foxc1Q61572 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms