Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.84■■□□□ 1.25
Ddx4Q61496 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.84■■□□□ 1.25
Ddx4Q61496 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
Ddx4Q61496 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx4Q61496 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx4Q61496 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.83■■□□□ 1.25
Ddx4Q61496 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx4Q61496 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx4Q61496 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Ddx4Q61496 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.83■■□□□ 1.24
Ddx4Q61496 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx4Q61496 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ddx4Q61496 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.82■■□□□ 1.24
Ddx4Q61496 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Gm40848-201ENSMUST00000221998 324 ntBASIC22.82■■□□□ 1.24
Ddx4Q61496 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx4Q61496 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx4Q61496 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx4Q61496 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx4Q61496 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx4Q61496 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ddx4Q61496 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ddx4Q61496 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx4Q61496 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx4Q61496 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Ddx4Q61496 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx4Q61496 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.8■■□□□ 1.24
Ddx4Q61496 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx4Q61496 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx4Q61496 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.8■■□□□ 1.24
Ddx4Q61496 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx4Q61496 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx4Q61496 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.78■■□□□ 1.24
Ddx4Q61496 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx4Q61496 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.77■■□□□ 1.24
Ddx4Q61496 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx4Q61496 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx4Q61496 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx4Q61496 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx4Q61496 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx4Q61496 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
Ddx4Q61496 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx4Q61496 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx4Q61496 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.76■■□□□ 1.23
Ddx4Q61496 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx4Q61496 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx4Q61496 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx4Q61496 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.75■■□□□ 1.23
Ddx4Q61496 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
Ddx4Q61496 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx4Q61496 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx4Q61496 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Ddx4Q61496 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.75■■□□□ 1.23
Ddx4Q61496 Smad6-203ENSMUST00000179458 273 ntBASIC22.75■■□□□ 1.23
Ddx4Q61496 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.75■■□□□ 1.23
Ddx4Q61496 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.75■■□□□ 1.23
Ddx4Q61496 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ddx4Q61496 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx4Q61496 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx4Q61496 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.74■■□□□ 1.23
Ddx4Q61496 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx4Q61496 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx4Q61496 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Ddx4Q61496 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ddx4Q61496 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Ddx4Q61496 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC22.73■■□□□ 1.23
Ddx4Q61496 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx4Q61496 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.73■■□□□ 1.23
Ddx4Q61496 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx4Q61496 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.73■■□□□ 1.23
Ddx4Q61496 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ddx4Q61496 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ddx4Q61496 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.72■■□□□ 1.23
Ddx4Q61496 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx4Q61496 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ddx4Q61496 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms