Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col11a1Q61245 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col11a1Q61245 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col11a1Q61245 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.66■■□□□ 1.38
Col11a1Q61245 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col11a1Q61245 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col11a1Q61245 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col11a1Q61245 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.65■■□□□ 1.38
Col11a1Q61245 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.65■■□□□ 1.38
Col11a1Q61245 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.65■■□□□ 1.38
Col11a1Q61245 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col11a1Q61245 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col11a1Q61245 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Col11a1Q61245 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.65■■□□□ 1.38
Col11a1Q61245 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Col11a1Q61245 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Col11a1Q61245 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col11a1Q61245 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col11a1Q61245 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.63■■□□□ 1.37
Col11a1Q61245 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col11a1Q61245 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col11a1Q61245 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Col11a1Q61245 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col11a1Q61245 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col11a1Q61245 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.62■■□□□ 1.37
Col11a1Q61245 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.61■■□□□ 1.37
Col11a1Q61245 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col11a1Q61245 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col11a1Q61245 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col11a1Q61245 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Col11a1Q61245 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col11a1Q61245 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col11a1Q61245 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col11a1Q61245 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col11a1Q61245 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.59■■□□□ 1.37
Col11a1Q61245 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col11a1Q61245 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col11a1Q61245 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
Col11a1Q61245 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a1Q61245 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a1Q61245 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Col11a1Q61245 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Col11a1Q61245 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.58■■□□□ 1.37
Col11a1Q61245 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.58■■□□□ 1.37
Col11a1Q61245 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a1Q61245 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Col11a1Q61245 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a1Q61245 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Col11a1Q61245 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a1Q61245 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a1Q61245 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Col11a1Q61245 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.56■■□□□ 1.36
Col11a1Q61245 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.56■■□□□ 1.36
Col11a1Q61245 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a1Q61245 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a1Q61245 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a1Q61245 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a1Q61245 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.56■■□□□ 1.36
Col11a1Q61245 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Col11a1Q61245 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Col11a1Q61245 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a1Q61245 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.55■■□□□ 1.36
Col11a1Q61245 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a1Q61245 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Col11a1Q61245 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Col11a1Q61245 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a1Q61245 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a1Q61245 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Col11a1Q61245 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.54■■□□□ 1.36
Col11a1Q61245 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a1Q61245 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a1Q61245 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Col11a1Q61245 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.54■■□□□ 1.36
Col11a1Q61245 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a1Q61245 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.53■■□□□ 1.36
Col11a1Q61245 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a1Q61245 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a1Q61245 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Col11a1Q61245 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a1Q61245 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col11a1Q61245 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Col11a1Q61245 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Col11a1Q61245 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Col11a1Q61245 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Col11a1Q61245 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col11a1Q61245 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.52■■□□□ 1.36
Col11a1Q61245 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Col11a1Q61245 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
Col11a1Q61245 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a1Q61245 Gm11421-201ENSMUST00000122124 294 ntBASIC23.51■■□□□ 1.35
Col11a1Q61245 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a1Q61245 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a1Q61245 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a1Q61245 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col11a1Q61245 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms