Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxd3Q61060 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.73■□□□□ 0.59
Foxd3Q61060 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Foxd3Q61060 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Foxd3Q61060 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxd3Q61060 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.72■□□□□ 0.59
Foxd3Q61060 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.72■□□□□ 0.59
Foxd3Q61060 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.72■□□□□ 0.59
Foxd3Q61060 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Foxd3Q61060 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxd3Q61060 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.71■□□□□ 0.59
Foxd3Q61060 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxd3Q61060 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Foxd3Q61060 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.71■□□□□ 0.59
Foxd3Q61060 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd3Q61060 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd3Q61060 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxd3Q61060 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.7■□□□□ 0.58
Foxd3Q61060 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.7■□□□□ 0.58
Foxd3Q61060 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.7■□□□□ 0.58
Foxd3Q61060 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Foxd3Q61060 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Foxd3Q61060 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.69■□□□□ 0.58
Foxd3Q61060 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxd3Q61060 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Foxd3Q61060 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxd3Q61060 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.68■□□□□ 0.58
Foxd3Q61060 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Foxd3Q61060 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Foxd3Q61060 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxd3Q61060 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxd3Q61060 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Foxd3Q61060 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Foxd3Q61060 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.66■□□□□ 0.58
Foxd3Q61060 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxd3Q61060 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Foxd3Q61060 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Foxd3Q61060 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd3Q61060 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd3Q61060 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd3Q61060 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd3Q61060 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxd3Q61060 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms