Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Tnfaip3Q60769 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Gm7143-201ENSMUST00000222811 859 ntBASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfaip3Q60769 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfaip3Q60769 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip3Q60769 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip3Q60769 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip3Q60769 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfaip3Q60769 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfaip3Q60769 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfaip3Q60769 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Gm21956-201ENSMUST00000179946 522 ntBASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfaip3Q60769 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfaip3Q60769 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfaip3Q60769 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfaip3Q60769 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.2■□□□□ 0.66
Tnfaip3Q60769 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms